# /projectnb/wax-es/routines/BIN/stringtie -L barcode133.sorted.filtered.spliced.bam -o barcode133.NOREF.spliced.gtf
# StringTie version 3.0.1
chr17	StringTie	transcript	35400329	35404711	1000	-	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; longcov "5.000000"; cov "5.554890"; FPKM "127519.804688"; TPM "158211.906250";
chr17	StringTie	exon	35400329	35401087	1000	-	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "5.555231";
chr17	StringTie	exon	35402213	35404711	1000	-	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "2"; cov "5.554786";
chr17	StringTie	transcript	35400329	35404711	1000	+	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; longcov "4.000000"; cov "4.444769"; FPKM "102035.507812"; TPM "126593.937500";
chr17	StringTie	exon	35400329	35401089	1000	+	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "1"; cov "4.444769";
chr17	StringTie	exon	35402215	35404711	1000	+	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "2"; cov "4.444769";
chr2	StringTie	transcript	121973226	121976822	1000	+	.	gene_id "STRG.3"; transcript_id "STRG.3.1"; longcov "2.000000"; cov "2.000000"; FPKM "45912.628906"; TPM "56963.109375";
chr2	StringTie	exon	121973226	121973540	1000	+	.	gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "1"; cov "2.000000";
chr2	StringTie	exon	121976609	121976822	1000	+	.	gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "2"; cov "2.000000";
chr2	StringTie	transcript	151368553	151385319	1000	-	.	gene_id "STRG.4"; transcript_id "STRG.4.1"; longcov "11.000000"; cov "11.318104"; FPKM "259821.953125"; TPM "322357.218750";
chr2	StringTie	exon	151368553	151368593	1000	-	.	gene_id "STRG.4"; transcript_id "STRG.4.1"; exon_number "1"; cov "11.000000";
chr2	StringTie	exon	151383112	151383232	1000	-	.	gene_id "STRG.4"; transcript_id "STRG.4.1"; exon_number "2"; cov "10.780304";
chr2	StringTie	exon	151385192	151385319	1000	-	.	gene_id "STRG.4"; transcript_id "STRG.4.1"; exon_number "3"; cov "11.928385";
chr2	StringTie	transcript	151368553	151385319	1000	+	.	gene_id "STRG.5"; transcript_id "STRG.5.1"; longcov "11.000000"; cov "11.000000"; FPKM "252519.468750"; TPM "313297.093750";
chr2	StringTie	exon	151368553	151368601	1000	+	.	gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "1"; cov "11.000000";
chr2	StringTie	exon	151383122	151383234	1000	+	.	gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "2"; cov "11.000000";
chr2	StringTie	exon	151385194	151385319	1000	+	.	gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "3"; cov "11.000000";