# /projectnb/wax-es/routines/BIN/stringtie -L MS329_441.sorted.filtered.spliced.bam -o MS329_441.NOREF.spliced.gtf
# StringTie version 3.0.1
chr19	StringTie	transcript	23134535	23141545	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; longcov "27.000000"; cov "48.295475"; FPKM "133717.656250"; TPM "336067.250000";
chr19	StringTie	exon	23134535	23134590	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "48.207344";
chr19	StringTie	exon	23134722	23134855	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "2"; cov "37.950253";
chr19	StringTie	exon	23141262	23141545	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "3"; cov "53.194050";
chr19	StringTie	transcript	23134535	23141545	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.2"; longcov "14.000000"; cov "36.636978"; FPKM "101438.304688"; TPM "254940.843750";
chr19	StringTie	exon	23134535	23134590	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.2"; exon_number "1"; cov "54.656696";
chr19	StringTie	exon	23134722	23141545	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.2"; exon_number "2"; cov "36.489105";
chr19	StringTie	transcript	23134535	23141545	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.3"; longcov "3.000000"; cov "6.759585"; FPKM "18715.539062"; TPM "47037.019531";
chr19	StringTie	exon	23134535	23134590	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.3"; exon_number "1"; cov "10.007868";
chr19	StringTie	exon	23134722	23139457	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.3"; exon_number "2"; cov "7.896667";
chr19	StringTie	exon	23139537	23141545	1000	+	.	gene_id "STRG.1"; transcript_id "STRG.1.3"; exon_number "3"; cov "3.988493";
chr19	StringTie	transcript	23134537	23141545	1000	-	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; longcov "19.000000"; cov "30.533958"; FPKM "84540.617188"; TPM "212472.562500";
chr19	StringTie	exon	23134537	23134586	1000	-	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "1"; cov "30.926346";
chr19	StringTie	exon	23134721	23134854	1000	-	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "2"; cov "24.621576";
chr19	StringTie	exon	23141259	23141545	1000	-	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "3"; cov "33.226082";
chr19	StringTie	transcript	23134537	23141545	1000	-	.	gene_id "STRG.2"; transcript_id "STRG.2.2"; longcov "16.000000"; cov "16.722620"; FPKM "46300.601562"; TPM "116365.453125";
chr19	StringTie	exon	23134537	23134586	1000	-	.	gene_id "STRG.2"; transcript_id "STRG.2.2"; exon_number "1"; cov "18.315845";
chr19	StringTie	exon	23134721	23141545	1000	-	.	gene_id "STRG.2"; transcript_id "STRG.2.2"; exon_number "2"; cov "16.710949";
chr4	StringTie	transcript	115721956	115738856	1000	+	.	gene_id "STRG.3"; transcript_id "STRG.3.1"; longcov "3.000000"; cov "3.992401"; FPKM "11053.923828"; TPM "27781.384766";
chr4	StringTie	exon	115721956	115722431	1000	+	.	gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "1"; cov "4.000000";
chr4	StringTie	exon	115738675	115738856	1000	+	.	gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "2"; cov "3.972528";