# /projectnb/wax-es/routines/BIN/stringtie LV72.sorted.filtered.unspliced.bam -o LV72.NOREF.unspliced.gtf
# StringTie version 3.0.1
chr10	StringTie	transcript	98880646	98881259	1000	-	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; cov "5.000000"; FPKM "18125.662109"; TPM "43596.820312";
chr10	StringTie	exon	98880646	98881259	1000	-	.	gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "5.000000";
chr15	StringTie	transcript	63755156	63755690	1000	-	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; cov "8.000000"; FPKM "29001.058594"; TPM "69754.914062";
chr15	StringTie	exon	63755156	63755690	1000	-	.	gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "1"; cov "8.000000";
chr16	StringTie	transcript	31486245	31486912	1000	+	.	gene_id "STRG.3"; transcript_id "STRG.3.1"; cov "5.000000"; FPKM "18125.662109"; TPM "43596.820312";
chr16	StringTie	exon	31486245	31486912	1000	+	.	gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "1"; cov "5.000000";
chr17	StringTie	transcript	18297277	18297697	1000	-	.	gene_id "STRG.4"; transcript_id "STRG.4.1"; cov "8.000000"; FPKM "29001.058594"; TPM "69754.914062";
chr17	StringTie	exon	18297277	18297697	1000	-	.	gene_id "STRG.4"; transcript_id "STRG.4.1"; exon_number "1"; cov "8.000000";
chr1	StringTie	transcript	60269615	60270054	1000	+	.	gene_id "STRG.5"; transcript_id "STRG.5.1"; cov "4.990909"; FPKM "18092.705078"; TPM "43517.554688";
chr1	StringTie	exon	60269615	60270054	1000	+	.	gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "1"; cov "4.990909";
chr1	StringTie	transcript	140732947	140734158	1000	+	.	gene_id "STRG.6"; transcript_id "STRG.6.1"; cov "5.966997"; FPKM "21631.154297"; TPM "52028.417969";
chr1	StringTie	exon	140732947	140734158	1000	+	.	gene_id "STRG.6"; transcript_id "STRG.6.1"; exon_number "1"; cov "5.966997";
chr3	StringTie	transcript	55282850	55283430	1000	+	.	gene_id "STRG.7"; transcript_id "STRG.7.1"; cov "5.000000"; FPKM "18125.662109"; TPM "43596.820312";
chr3	StringTie	exon	55282850	55283430	1000	+	.	gene_id "STRG.7"; transcript_id "STRG.7.1"; exon_number "1"; cov "5.000000";
chr3	StringTie	transcript	79901049	79901454	1000	-	.	gene_id "STRG.8"; transcript_id "STRG.8.1"; cov "4.980296"; FPKM "18054.232422"; TPM "43425.015625";
chr3	StringTie	exon	79901049	79901454	1000	-	.	gene_id "STRG.8"; transcript_id "STRG.8.1"; exon_number "1"; cov "4.980296";
chr3	StringTie	transcript	107047000	107047408	1000	+	.	gene_id "STRG.9"; transcript_id "STRG.9.1"; cov "6.000000"; FPKM "21750.792969"; TPM "52316.183594";
chr3	StringTie	exon	107047000	107047408	1000	+	.	gene_id "STRG.9"; transcript_id "STRG.9.1"; exon_number "1"; cov "6.000000";
chr5	StringTie	transcript	138783203	138783716	1000	+	.	gene_id "STRG.10"; transcript_id "STRG.10.1"; cov "9.988327"; FPKM "36209.007812"; TPM "87091.859375";
chr5	StringTie	exon	138783203	138783716	1000	+	.	gene_id "STRG.10"; transcript_id "STRG.10.1"; exon_number "1"; cov "9.988327";
chr6	StringTie	transcript	36928377	36928607	1000	+	.	gene_id "STRG.11"; transcript_id "STRG.11.1"; cov "6.982684"; FPKM "25313.154297"; TPM "60884.566406";
chr6	StringTie	exon	36928377	36928607	1000	+	.	gene_id "STRG.11"; transcript_id "STRG.11.1"; exon_number "1"; cov "6.982684";
chr6	StringTie	transcript	87600097	87600509	1000	+	.	gene_id "STRG.12"; transcript_id "STRG.12.1"; cov "5.973366"; FPKM "21654.242188"; TPM "52083.953125";
chr6	StringTie	exon	87600097	87600509	1000	+	.	gene_id "STRG.12"; transcript_id "STRG.12.1"; exon_number "1"; cov "5.973366";
chr6	StringTie	transcript	122912501	122914763	1000	-	.	gene_id "STRG.13"; transcript_id "STRG.13.1"; cov "22.804684"; FPKM "82669.992188"; TPM "198842.343750";
chr6	StringTie	exon	122912501	122914763	1000	-	.	gene_id "STRG.13"; transcript_id "STRG.13.1"; exon_number "1"; cov "22.804684";
chr8	StringTie	transcript	44986979	44987227	1000	-	.	gene_id "STRG.14"; transcript_id "STRG.14.1"; cov "5.000000"; FPKM "18125.662109"; TPM "43596.820312";
chr8	StringTie	exon	44986979	44987227	1000	-	.	gene_id "STRG.14"; transcript_id "STRG.14.1"; exon_number "1"; cov "5.000000";
chr8	StringTie	transcript	58091696	58092432	1000	-	.	gene_id "STRG.15"; transcript_id "STRG.15.1"; cov "5.000000"; FPKM "18125.662109"; TPM "43596.820312";
chr8	StringTie	exon	58091696	58092432	1000	-	.	gene_id "STRG.15"; transcript_id "STRG.15.1"; exon_number "1"; cov "5.000000";
chr9	StringTie	transcript	117284347	117284727	1000	+	.	gene_id "STRG.16"; transcript_id "STRG.16.1"; cov "6.000000"; FPKM "21750.792969"; TPM "52316.183594";
chr9	StringTie	exon	117284347	117284727	1000	+	.	gene_id "STRG.16"; transcript_id "STRG.16.1"; exon_number "1"; cov "6.000000";